MoDPepInt Server
SH3PepInt - Results
BIF
IFF
SH3PepInt 9575848

Input and runtime details for job 9575848 (precomputed example)

Input Parameters

? Protein/Peptide FASTA[.fa]
? Protein UniProt IDs[.fa]
? SH3 Domains ABL, LCK, PIK3R1
? Step size5

Filters

? Proline-rich peptidesyes
? Cellular localization (needs UniProt IDs)yes

Job ID 9575848 (server version 4.2.2)

?Job Submitted & Queued@ Fri Jul 22 10:49:38 CEST 2016
?SH3PepInt Started@ Fri Jul 22 10:49:42 CEST 2016
?SH3PepInt Finished & Post-Processing@ Fri Jul 22 10:50:27 CEST 2016
?Job Completed@ Fri Jul 22 10:50:30 CEST 2016
 DIRECT ACCESS: http://modpepint.informatik.uni-freiburg.de/RetrieveResults.jsp?jobID=9575848&toolName=SH3PepInt ( 30 days expiry )

Description of the job

This is an example for the interaction prediction of human SH3 domains from ABL, LCK and PIK3R1 proteins with the target proteins PIK3C2B, PPP3CA and SYNJ1.

Output download complete results [zip]

[Download] the following interaction table ?
Sort by selecting a column name.
Sequence ID Position Sequence Domain
sp|O00750|P3C2B_HUMAN 151-165 CKKLSPPPLPPRASI ABL, LCK, PIK3R1
sp|O00750|P3C2B_HUMAN 161-175 PRASIWDTPPLPPRK PIK3R1
sp|O00750|P3C2B_HUMAN 166-180 WDTPPLPPRKGSPSS PIK3R1
sp|O00750|P3C2B_HUMAN 276-290 RSKTMPPQVPPRTYA PIK3R1
sp|O00750|P3C2B_HUMAN 556-570 NQLPPCPSRMQPKIQ PIK3R1
sp|O00750|P3C2B_HUMAN 1421-1435 PSSHLPSFPSRFVIG ABL
sp|Q08209|PP2BA_HUMAN 16-30 RVVKAVPFPPSHRLT ABL, PIK3R1
sp|Q08209|PP2BA_HUMAN 1631-1645 PSLPIRPSRAPSRTP PIK3R1
sp|Q08209|PP2BA_HUMAN 2101-2115 VLPSRRPPPPPVPLL ABL, PIK3R1

Job resubmission

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When using SH3PepInt please cite :

Results are computed with SH3PepInt version 1.0.0