MoDPepInt Server
MetaServer - Results
BIF
IFF
MetaServer 4305227

Input and runtime details for job 4305227 (precomputed example)

Input Parameters

? Protein/Peptide FASTA[.fa]
? Protein UniProt IDs[.fa]

Job ID 4305227 (server version 4.2.2)

?Job Submitted & Queued@ Fri Jul 22 10:50:21 CEST 2016
?Processing Started@ Fri Jul 22 10:50:27 CEST 2016
?MetaServer Finished & Post-Processing@ Fri Jul 22 11:01:20 CEST 2016
?Job Completed@ Fri Jul 22 11:01:22 CEST 2016
 DIRECT ACCESS: http://modpepint.informatik.uni-freiburg.de:80/RetrieveResults.jsp?jobID=4305227&toolName=MetaServer ( 30 days expiry )

Output download complete results [zip]

SH2-peptide interactions (top 5 per domain)

Select rows: 1-26 all
Sort by selecting a column name
Sequence ID Position Sequence Domain
Sample-1 Y24 KRYAWKR EAT2, FGR, HCK
Sample-1 Y48 EYYKNDH BMX, GRAP2, GRB2, MIST, SOCS5, TEC, VAV1
Sample-1 Y83 NSYIFDI BLK, GRB14
Sample-1 Y95 IFYLVAD BMX, E109111, SH2D2A
Sample-1 Y183 QDYLLLI BRDG1, SH2B, SHC1, SHC3, SRC, TENS1
Sample-1 Y242 MIYDSPP ABL1, FRK, LCP2, NCK1, NCK2
Sample-1 Y259 SLYNLPR ABL1, ABL2, BLK, CRKL, CRK, CTEN, NCK2, SH2D1A, SH2D3C
Sample-1 Y285 ELYVFNT APS, BCAR3, BTK, CRK, CTEN, E105251, E109111, EAT2, GRB10, GRB14, SH2B, SH2D1A, TENC1, TNS, TXK, YES1
Sample-1 Y307 ISYDIPP ABL1, ABL2, APS, BMX, BRDG1, BTK, CRKL, CRK, CTEN, E105251, E109111, FGR, FRK, GRB14, HCK, INPPL1, ITK, LCK, LCP2, LYN, MATK, MIST, NCK1, NCK2, PTK6, SH2B, SH2D1A, SH2D2A, SH2D3C, SHC3, SOCS5, SRC, TEC, TENC1, TENS1, TNS, TXK, VAV1, VAV2, YES1
Sample-1 Y317 NTYQIPR ABL1, BCAR3, BLK, CRKL, CRK, E109111, FGR, GRB10, HCK, LCK, LCP2, LYN, MATK, MIST, SH2D3C, SOCS2, SOCS5, SRC, VAV1
Sample-1 Y373 SSYCIPT ABL2, CTEN, E185634, INPPL1, MATK, VAV1, VAV2
Sample-1 Y406 DCYDIPR ABL1, ABL2, BCAR3, BLK, BRDG1, BTK, CRKL, CRK, CTEN, E105251, E185634, FES, FRK, GRB10, GRB14, HCK, INPPL1, ITK, LCK, LCP2, MIST, NCK1, NCK2, PTK6, SHC1, SHC3, SRC, TEC, TENC1, TENS1, TNS, TXK, VAV1
Sample-1 Y447 ENYVPMN SOCS2
Sample-1 Y472 ANYVPMT LYN, NCK1
Sample-1 Y589 ENYVPMN SOCS2
Sample-1 Y627 VEYLDLD APS, FRK, SH2B
Sample-1 Y659 VDYVVVD EAT2, MATK, PTK6, SHC1
Sample-2 Y8 GLYGLGE E185634, EAT2, FGR, INPPL1, SHC3
Sample-2 Y60 DGYGSLP APS, E105251, FES, FRK, GRB10, GRB14, LCP2, MIST, SH2B, SHC1, SHC3, SOCS2, SOCS5
Sample-2 Y132 LRYFDPL ABL2, APS, BMX, BRDG1, BTK, CRKL, E105251, GRB10, GRB2, HCK, LCK, LYN, PTK6, SH2D2A, SH2D3C, TEC, TENC1, TENS1, TNS, TXK, VAV2, YES1
Sample-2 Y155 LYYYQSG BCAR3, SH2D1A
Sample-2 Y156 YYYQSGG BCAR3, EAT2, SH2D1A
Sample-2 Y180 KFYELGD E185634, FER, FES, NCK1, NCK2, SH2D2A, SOCS5, YES1
Sample-2 Y219 FEYPESS ITK
Sample-2 Y323 IPYFITL BLK, BMX, BRDG1, BTK, E109111, E185634, FGR, INPPL1, LCK, LYN, MATK, PTK6, SH2D2A, SH2D3C, SHC1, SOCS2, SRC, TEC, TENC1, TENS1, TNS, TXK, VAV2, YES1
Sample-2 Y507 CPYLPGT VAV2
Rows: 1-26 all
[Download] the SH2 interaction table ?
If you are interested in a deeper screen for this domain, please refer to the dedicated tool. It offers further filtering options and will provide the complete interaction list. You can directly feed your input with the following button.
Feeds the job parameters to the SH2PepInt input page to resubmit the job.

SH3-peptide interactions (top 5 per domain)

Select rows: 1-4 all
Sort by selecting a column name
Sequence ID Position Sequence Domain
Sample-1 341-355 PPPRPPKPHPAHDRS AMPHIPHYSIN_I, ARGBP2a-1, DDEF2, ENDOPHILIN1, ENDOPHILIN2, ENDOPHILIN3, FGR, GRAP2-2, PIK3R1, SH3PX3, SNX9, TUBA-6
Sample-1 491-505 PPAHMGFRSSPKTPP CIN85-3, RASGAP, STAM1
Sample-1 501-515 PKTPPRRPVPVADCE AMPHIPHYSIN_I, ARGBP2a-1, ENDOPHILIN1, FGR, INTERSECTIN1-3, OSTF1, PAC3, SH3PX3, TUBA-3, TUBA-6
Sample-2 501-515 HVTSCPYLPGTLGQH EPS8L2, IRSP53
Rows: 1-4 all
[Download] the SH3 interaction table ?
If you are interested in a deeper screen for this domain, please refer to the dedicated tool. It offers further filtering options and will provide the complete interaction list. You can directly feed your input with the following button.
Feeds the job parameters to the SH3PepInt input page to resubmit the job.

PDZ-peptide interactions (top 5 per domain)

Select rows: 1-1 all
Sort by selecting a column name
Sequence ID Position Sequence Domain
Sample-1 690-694 AKSVK GIPC2_Mouse, GIPC1_Mouse, PATJ-2_Drome, MPDZ-3_Mouse, GIPC2_Human, GIPC3_Human, GIPC3_Mouse, INADL-3_Human, INADL-3_Mouse, MPDZ-3_Human, GIPC1_Human
Rows: 1-1 all
[Download] the PDZ interaction table ?
If you are interested in a deeper screen for this domain, please refer to the dedicated tool. It offers further filtering options and will provide the complete interaction list. You can directly feed your input with the following button.
Feeds the job parameters to the PDZPepInt input page to resubmit the job.

Job resubmission

Use the following button if you want to resubmit the job with altered input or parameterization:
Feeds the job parameters to the input page to resubmit the job.

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When using MetaServer please cite :

Results are computed with MetaServer version 1.0.0