Input and runtime details for job 2334483 (precomputed example)

Input Parameters

	Protein/Peptide FASTA		[.fa]
	Protein UniProt IDs		[.fa]
	PDZ Domains		DLG1-1_Drome, DLG1-2_Drome, DLG4-1_Human, GIPC1_Mouse, INADL-2_Mouse, NHRF1-1_Human, SNTB1_Human, SNTG2_Human
	Custom PDZ Domain		[.fa]

	Intrinsically unstructured/disordered region		yes
	Cellular localization (needs UniProt IDs)		yes

	Job Submitted & Queued		@ Fri Jul 22 10:50:03 CEST 2016
	PDZPepInt Started		@ Fri Jul 22 10:50:13 CEST 2016
	PDZPepInt Finished & Post-Processing		@ Fri Jul 22 10:50:25 CEST 2016
	Job Completed		@ Fri Jul 22 10:50:27 CEST 2016

This is an example for the PDZ-peptide interaction prediction. PDZ domains from different organisms bind with their respective peptides.

Download an archive file containing the complete results produced by the job in [.zip] format.

results in binding-results.txt

Kousik Kundu, Martin Mann, Fabrizio Costa, and Rolf Backofen
MoDPepInt: An interactive webserver for prediction of modular domain-peptide interactions
Bioinformatics, 2014, in press.
Kousik Kundu and Rolf Backofen
Cluster based prediction of PDZ-peptide interactions
BMC Genomics, 15 Suppl 1 pp. S5, 2014.

Results are computed with PDZPepInt version 1.0.0